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How to write a parser in python with ply

Posted by: maria | in Geek-ish, Science | 3 months, 2 weeks ago | 0 comments

Parser writing can be tedious, and, more importantly a very difficult exercice.

Introduction to the secondary structure of RNAs: dihedral angles and interactions

Posted by: maria | in RNA, Science | 11 months, 1 week ago | 0 comments

In a a previous article I mentionned the PDB that contains the atomic coordinates of some RNAs. The question now is: what kind of information can we extract from a PDB file?

Introduction to the secondary structure of RNAs: representation

Posted by: maria | in RNA, Science | 11 months, 1 week ago | 0 comments
I specialized during my master's degree and my PhD in structure of RNAs. Here is some of the basic knowledge I gathered during the first few weeks of my master's degree internship.

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